PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g614500.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 217aa    MW: 24800.8 Da    PI: 7.0325
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g614500.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.4e-171358148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+ +++E++l+v+++k+lG++ W++Ia +++ gRt++++k++w+++l
  Pd.00g614500.m01 13 RGNISADEEDLIVRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 58
                      7899******************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MRWVNYLRPG IKRGNISADE EDLIVRLHKL LGNRWSLIAG RIPGRTDNEI KNYWNTHLSR  60
RSSSDQELLE HHKPSINPKN QHNKKGLIPS DQSHKAKAIR PKHFKCTKVD VGIPSHLQDD  120
QDHQIMVDTT NNINGFSSSS VPAGSSSNDL FILDLLNSTE IQQAQMKEWQ VAMVENYWRG  180
SPIIAAVDPF EPNIDGEVAF NALSSFMNIE DYQYWIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.11e-34MYB family protein