PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g614520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 325aa MW: 36429.3 Da PI: 4.7369

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g614520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.6e-16	41	88	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed+ l+++++ +G g W+ +++ g++R++k+c++rw++yl Pd.00g614520.m01 41 KGAWSAWEDKALANYINTHGEGKWRDLPQRAGLNRCGKSCRLRWLNYL 88 79********************************************97 PP
2	Myb_DNA-binding	54.2	3.3e-17	94	138	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+el+v+++k+lG++ W++I+ +++ gRt++++k++w++ Pd.00g614520.m01 94 RGNISPEEEELIVRLHKLLGNR-WSLISGRLP-GRTDNEIKNYWNTN 138 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MALPMSRVHV VGETWVELCC WAVKSGKITL NVYGTGTGLN KGAWSAWEDK ALANYINTHG 60 EGKWRDLPQR AGLNRCGKSC RLRWLNYLRP DIKRGNISPE EEELIVRLHK LLGNRWSLIS 120 GRLPGRTDNE IKNYWNTNLS KRSEQGSDKA HQDQRSASTS SKDDTEKSNN PASKSSVQVI 180 RTKAFKCRKV AIPSHLDGHD QMLERANVAP GSDSESLCSS AAQEHDSSFG FLRDFDINDM 240 LIEDVLSSDF QQAQINDCDQ DMLECGITKI EDLLMGEARL GEWRADDDDQ DDPLEPNDDD 300 HGDANGFNAL SSFLNSVDDD QWIIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	3e-59	MYB family protein