PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g615050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 213aa    MW: 23750 Da    PI: 4.8004
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g615050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-181867255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  Pd.00g615050.m01 18 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 67
                      7*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVKQQQTIGK PSERNDFKYK GVRKRKWGKW VSEIRLPNSR ERIWLGSYDS AEKAARAFDA  60
ALFCLRGRTA KFNFPDNPPE ISGGRTLSPA EIQAEAARFA NSEPQTTQHH SDHSMSELQT  120
ESQSPSPSVS EGSGTVPMDS DFQVTQNDSF SDLFRTFGSG NYATEYGLFP GFDELNGQFF  180
SPATTEPTTG VDYYAEENLD GAMPAQGSFL WNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12026KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-60ERF family protein