PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g617810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family DBB
Protein Properties Length: 184aa    MW: 20303.1 Da    PI: 6.7642
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g617810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.51.2e-07433534
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                       C+ +e+  ++ fC  ++  lC+ C ++ H
  Pd.00g617810.m01  4 LCDSCESAAAIVFCAADEAALCPACDEKVH 33
                      7**************************998 PP
2zf-B_box27.85.3e-095291237
          zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
                      e ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H
  Pd.00g617810.m01 52 EVPRCDICENAPAFFYCEIDGSSLCLQCDMVVHVGgkrtH 91
                      789***************************9996545555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MRTLCDSCES AAAIVFCAAD EAALCPACDE KVHMCNKLAS RHVRVGLATP SEVPRCDICE  60
NAPAFFYCEI DGSSLCLQCD MVVHVGGKRT HGRYLVLRQR VEFPGDKPGN VDDPASQPID  120
PGETRRVQHQ PPRMTIGANQ QNHRASPIRI SDANADGHVK MDTKLIDLNM KPHRMHEQAS  180
NKED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.12e-76DBB family protein