PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g618740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 234aa    MW: 25918.7 Da    PI: 8.815
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g618740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.72.1e-20109143135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  Pd.00g618740.m01 109 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 143
                       ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGTWPVHVHA VSSTTPNPIP PSPCSSPCPT ITSRTPSTRL TENDVVLDDK RTRNERRSVS  60
NFCWDLLQPK HHATSSHHHK NGSHRSGGNG NGVSNAVHSN NDPLLARRCA NCDTTSTPLW  120
RNGPRGPKSL CNACGIRFKK EERRATAAAA NGASSSVVGM EHNSHMLSQH HHNNSWMPHS  180
QTQKMPCFSP AMGNEFRFME DDTAHHENDA TGIPFLSWRL NVTDRPSLVH DFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.13e-43GATA family protein