PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g618860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 794aa    MW: 86649.6 Da    PI: 5.2139
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g618860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS347.52.2e-1062205792363
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        ++Ll+cA+ ++++d  +a + L rl+e +s +gdp++R+ +yfteAL++r+++   +  k+l++++t ++  ++ + ++k++++++P+ kf+
  Pd.00g618860.m01 220 LKALLDCAR-LAESDPDRAVKSLIRLRESVSDRGDPTERVGFYFTEALQSRVSS--LQSEKSLAATTTYDTACEDFTLSYKALNDACPYSKFA 309
                       689******.566699999***********************************..6666778888888888********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       hltaNqaIle +e+++++Hi+Df+i qG+QW+aLlqaLa+R+ g+p ++Ri g+ +p+ g   + +l  tg+rL++fA+ l+++fef++ + +
  Pd.00g618860.m01 310 HLTANQAILEGTERATKIHIVDFGIVQGVQWAALLQALATRSTGKPsRIRISGIPAPSLGtsPAASLFVTGNRLRDFAKLLELNFEFEP-ILT 401
                       ******************************************666659*********999989999***********************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                        +++l+ + +rv+p+EalaVnl+lql++llde+ +  +   + Lkl ksl+Pk+v++ e ea++++  F  rf +al+yy+alf+sle ++pr
  Pd.00g618860.m01 402 PVHELDESCFRVEPDEALAVNLMLQLYNLLDETPTAVQ---SALKLAKSLNPKIVTLGEYEANLSRVGFTSRFKNALKYYTALFESLEPNMPR 491
                       ******************************99999998...9*************************************************** PP

              GRAS 278 eseerikvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWk 363
                       +s er kvE+ llgr+i+ vv  e+   +rer e +e+W+  +e++GF+pv+ls++a++qak ll ++++  y++ e+  gs+  gWk
  Pd.00g618860.m01 492 DSPERLKVEKLLLGRRICGVVGPEQPGtKRERFEDKEQWKYLMESSGFEPVALSHYAVSQAKILLWNYNNSLYSLIESpPGSFNTGWK 579
                       ***********************998769****************************************9989977662666669997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 794 aa     Download sequence    
MLTKPSCDPV VSGPPVVGFR LDLAGEWHIC AQTVAISWRL LSNPNLGYGL TGSGYTDPFQ  60
LAGSSDAGGE PGFPFPNLDH HPTGFRFSDL GGGGAAEFDS DEWMDSIIGG GDSTDSSNLP  120
SACDTWHGSN ADFGLYGADP FQPPCPSRLS NPCSPPSDLN RVIFSETQKQ LPAWTAPPPP  180
PPAPHVVVKQ AKSADPPPQP NDAVGVSSRS PEIESAPPLL KALLDCARLA ESDPDRAVKS  240
LIRLRESVSD RGDPTERVGF YFTEALQSRV SSLQSEKSLA ATTTYDTACE DFTLSYKALN  300
DACPYSKFAH LTANQAILEG TERATKIHIV DFGIVQGVQW AALLQALATR STGKPSRIRI  360
SGIPAPSLGT SPAASLFVTG NRLRDFAKLL ELNFEFEPIL TPVHELDESC FRVEPDEALA  420
VNLMLQLYNL LDETPTAVQS ALKLAKSLNP KIVTLGEYEA NLSRVGFTSR FKNALKYYTA  480
LFESLEPNMP RDSPERLKVE KLLLGRRICG VVGPEQPGTK RERFEDKEQW KYLMESSGFE  540
PVALSHYAVS QAKILLWNYN NSLYSLIESP PGSFNTGWKP ISFSTPLTVV LVRCFFFFFM  600
IRNGTQDCPS ELTVVSLKTV IRVGDFGGTL FHYGTGDEFD VFGRVILSET GRMCSDDDIM  660
HGAKWSHPSL VLLPSGGREE TLAIVLLLSK CLGRKAFGVR FKQTTTLRSS ESDSGHNMDK  720
PEPNPTEKTR DGLSHSFGEG YATRCDDDGF GVVYGGVRSV PKTEQEENHP AVDKSQGSEV  780
QEKEKARHQT YASS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein