PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g619850.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 312aa    MW: 35591.3 Da    PI: 9.1917
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g619850.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.85.4e-151096197
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                      ffk+l   + +++ +l +p  f  ++ g+++++    +l+++ g +W+v++  +k  ++++++kGWkeFv+++gLk  +f++F++ g+s+f   v
  Pd.00g619850.m01 10 FFKAL--VHDFSN-QLKIPPAFYVHFaGEVPRR---SVLRTPAG-TWNVNV--EKVNDGFFFQKGWKEFVHDHGLKLCEFLIFRYAGNSKF--DV 93
                      67777..556665.5********8887666665...46677665.9*****..99999*****************************9999..55 PP

                      EEE CS
                B3 95 kvf 97
                       v+
  Pd.00g619850.m01 94 DVY 96
                      444 PP
2B363.63e-20222309498
                       E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                       ++ ++ + ++g lv+pk+f +++ gkk   k ++l+d s r+W vk+i +++s+r  l++GW +Fv++  Lk+gD++vF+l++r+++ ++v++
  Pd.00g619850.m01 222 IM-HKAYVNKGKLVIPKSFQNSCIGKK---KYVRLQD-SKRRWLVKCISNRNSSR--LSAGWYQFVRDRALKVGDVCVFELIDRNDAVMKVSI 307
                       44.444455566********9995553...4699999.899******88888877..9**************************9*99****9 PP

                       E- CS
                B3  97 fr 98 
                       fr
  Pd.00g619850.m01 308 FR 309
                       98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MARRRRKPSF FKALVHDFSN QLKIPPAFYV HFAGEVPRRS VLRTPAGTWN VNVEKVNDGF  60
FFQKGWKEFV HDHGLKLCEF LIFRYAGNSK FDVDVYGRNG CKKEFVMAVS KNDRSLEEGH  120
DNAIHGTQNV DGQGFGSADG TTTSQAICAI KNEVIDVESD TSMDIDEPDT QEDQLNEDSE  180
IGLPRELGST EHFYSRTQME NPSEALEAAK KFSSKHPLFR AIMHKAYVNK GKLVIPKSFQ  240
NSCIGKKKYV RLQDSKRRWL VKCISNRNSS RLSAGWYQFV RDRALKVGDV CVFELIDRND  300
AVMKVSIFRC NS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-32B3 family protein