PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g619860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 288aa    MW: 33139.1 Da    PI: 10.4053
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g619860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.93.1e-121097198
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      ffkvl     + s++l +p +f+ +++g+ +++   +l++ s  +W v++  +k  ++++++kG k+Fv++++Lk  +f+vF + g+ +f  +v 
  Pd.00g619860.m01 10 FFKVL--VGDF-SNQLQIPPPFLVHFNGNVPQQ--SRLRT-SAGTWAVNV--KKVNDKFFFQKGLKKFVHDHDLKLCEFLVFGYAGNLGF--YVD 94
                      56666..3444.456*******98885554453..56666.7789*****..999999**************************998888..777 PP

                      EE- CS
                B3 96 vfr 98
                      ++ 
  Pd.00g619860.m01 95 IYG 97
                      765 PP
2B361.51.4e-19182263186
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       ffk+ +++++ ++g ++lp++f+++h   +e++ t+tl+ ++g++W vkl +++ +g+  l+ G   F+++n+L++gD++vF l++
  Pd.00g619860.m01 182 FFKIAIQNSYIRRGYMYLPRNFVRTHL--TEQQATVTLRVSDGKTWPVKLAFEGERGK--LGCGFMTFCRDNKLEVGDMCVFVLIN 263
                       99************************5..346779***************99888888..**********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MVMARRKPSF FKVLVGDFSN QLQIPPPFLV HFNGNVPQQS RLRTSAGTWA VNVKKVNDKF  60
FFQKGLKKFV HDHDLKLCEF LVFGYAGNLG FYVDIYGRDG CKKKFVTAIR ERGRRPHEEG  120
HGNVIHRRSP RHHGKQNLPS IDPIKYEATD TESETSMHPL ATSTGKTIPL QRNNSFNSEK  180
PFFKIAIQNS YIRRGYMYLP RNFVRTHLTE QQATVTLRVS DGKTWPVKLA FEGERGKLGC  240
GFMTFCRDNK LEVGDMCVFV LINKIEYLFE AVFYRKTEAS SCTSSPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18090.16e-18B3 family protein