PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g619890.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 365aa MW: 41197.4 Da PI: 10.202

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g619890.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	53.4	4.7e-17	100	177	13	93
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..E CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelv 93 +++lp kf++eh ++ + +l + gr W vkl +++++ r+ +++GW F ++n+L+ gD++vF+l+++ + + Pd.00g619890.m01 100 GYCMSLPAKFVKEHFNQVHD--NAILHVLGGRAWPVKLGHWGRG-RIRFQSGWGTFLRDNHLEIGDVCVFELISNiKPL-FD 177 4569********655444..6999********888885.899*********************99875444.44 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MVNSLETKAV PSTIAAPTLT LQRYMEANCN QQKETFALHD PGHGGGKSIT ARFPKRTEPI 60 LGRLHPSTTS GKAIALQRAK AFKSDDPFFM VSMGRTNIDG YCMSLPAKFV KEHFNQVHDN 120 AILHVLGGRA WPVKLGHWGR GRIRFQSGWG TFLRDNHLEI GDVCVFELIS NIKPLFDVVF 180 FRATKAPNCT LSPDVDGEQT VPKMEETYED DGFIETVDDY PSCPKTRKKS PIEPQPHKKN 240 RTCSISKAES KIKDVCGASR TRKFLVRGTE VPRRIDPVAA TGKDIALQRA KAFKSEYPFC 300 WVVMHHSYIH RSYLRLPAKI SKEHINWTHG NIVLHVPNGR TWPVKLGQDA RGRRYKSCKL 360 YLVTS

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MVNSLETKAV PSTIAAPTLT LQRYMEANCN QQKETFALHD PGHGGGKSIT ARFPKRTEPI  60
LGRLHPSTTS GKAIALQRAK AFKSDDPFFM VSMGRTNIDG YCMSLPAKFV KEHFNQVHDN  120
AILHVLGGRA WPVKLGHWGR GRIRFQSGWG TFLRDNHLEI GDVCVFELIS NIKPLFDVVF  180
FRATKAPNCT LSPDVDGEQT VPKMEETYED DGFIETVDDY PSCPKTRKKS PIEPQPHKKN  240
RTCSISKAES KIKDVCGASR TRKFLVRGTE VPRRIDPVAA TGKDIALQRA KAFKSEYPFC  300
WVVMHHSYIH RSYLRLPAKI SKEHINWTHG NIVLHVPNGR TWPVKLGQDA RGRRYKSCKL  360
YLVTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	4e-13	B3 family protein