PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g619920.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 295aa MW: 33919.4 Da PI: 7.117

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g619920.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.3	6e-18	216	295	17	99
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++p +fa+++ + +++t+tl+ + rsW v+li + + ++ l++GW+ F+ +n L+egD+++F+l++r++ l+v++fr+ Pd.00g619920.m01 216 TVPIRFARSFVKR--RKQTVTLQV-RERSWPVNLIGWTNESSAKLSGGWSAFATENCLREGDVCTFELIERNDIVLKVHIFRH 295 68999999644..555777655.88***************************************99999***996 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MKFVMKYGEH LSSPVHLKLP NGAEWDIELR RGNNGGVWFD KGWPEFSKFC SLDYANWLVF 60 GYEGNSNFHV LIFDRTSTEV EYAMTKPEME ETDYEEEDDN SVEILDGFPL CPRKAREKSP 120 LPCPQPHKKM RTRGKAECNI NFRPTKTQTS LRNKASDCSR SEMKKEDESD DDSVETLDTF 180 PSCLKTEVKD RVGRMHASTT CGKAIALQRA IAFESTVPIR FARSFVKRRK QTVTLQVRER 240 SWPVNLIGWT NESSAKLSGG WSAFATENCL REGDVCTFEL IERNDIVLKV HIFRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	4e-15	B3 family protein