PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g622550.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 212aa MW: 23420.6 Da PI: 10.2189

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g622550.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.6	5.1e-17	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d++k +G g+W++ ++ g++R++k+c++rw +yl Pd.00g622550.m01 34 KGAWSKQEDQKLIDYIKAHGEGCWRSLPKAAGLHRCGKSCRLRWINYL 81 79********************************************97 PP
2	Myb_DNA-binding	52.5	1.1e-16	87	131	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++ Pd.00g622550.m01 87 RGNFEQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSH 131 899*****************.*****.*********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MRELRAPTAI LATVEGGGGL NWGKLGNLDR GTNKGAWSKQ EDQKLIDYIK AHGEGCWRSL 60 PKAAGLHRCG KSCRLRWINY LRPDIKRGNF EQDEEDLIIK LHALLGNRWS LIAGRLPGRT 120 DNEVKNYWNS HIRKKLIKMG IDPNNHRLNQ IIPRPNPQND CVSAAATSSG SMSNISACTK 180 APIKSSREID QRASQATSVL EDETSGIGKG GN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-72	MYB family protein