PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g622950.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 183aa MW: 21541.5 Da PI: 10.37

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g622950.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.3	2.8e-16	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd+ll ++++ +G g W+ ++++ g++R++k+c++rw++yl Pd.00g622950.m01 10 KGAWTREEDDLLRQCIENHGEGKWHQVPNKEGLNRCRKSCRLRWLNYL 57 79********************************************97 PP
2	Myb_DNA-binding	43.5	7.2e-14	63	106	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg + ++E +l++++ k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g622950.m01 63 RGEFAEDEVDLIIRLQKLLGNR-WSLIAGRLP-GRTANDVKNYWNT 106 78999***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MEGYNLGVRK GAWTREEDDL LRQCIENHGE GKWHQVPNKE GLNRCRKSCR LRWLNYLKPN 60 IKRGEFAEDE VDLIIRLQKL LGNRWSLIAG RLPGRTANDV KNYWNTRLRT DSRLKKVKDK 120 PQETIKTIVI RPQPRSFIKS SNCLSSKEPI LDHIQTFENF STPSQTSSPT KNGNDWWETY 180 VFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	4e-62	MYB family protein