PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g625710.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 756aa MW: 86010.7 Da PI: 6.551

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g625710.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.2	1e-26	203	305	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k+ e++ +r+ ++t+Cka+++vk++ dgkw+++++ Pd.00g625710.m01 203 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSynrprarqnkqdPENATGRRSCSKTDCKASMHVKRRPDGKWVIHNF 295 5****************************************99999999988776554555559999******************** PP FAR1 82 eleHnHelap 91 ++eHnHel p Pd.00g625710.m01 296 VKEHNHELLP 305 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 756 aa Download sequence
MLESHVLGSQ DEKEIGISVF LSENIENKLG AKLKDLRIGH SLNPLACAII FPSLRSKLSP 60 SPPPSSICNT QRESQSVILS FKIRWEVILV PYIVLQTSKM IFSDNNQLKL NNLTMDIDLR 120 LPSGEPDKED EEPHGIDNML EHEEKLQNGD IENGNIVDVR DEVHAEDGGD LNSPTADMVV 180 FKEDTNLEPL FGMEFASHGE AYSFYQEYAR SMGFNTAIQN SRRSKTSREF IDAKFACSRY 240 GTKREYDKSY NRPRARQNKQ DPENATGRRS CSKTDCKASM HVKRRPDGKW VIHNFVKEHN 300 HELLPAQAVS EQTRKMSSTN EEFEKRWWKI LEKFELKDDE WTQSLYEDRK QWVPTYMRDV 360 CLAGMSAVQR SESVNSFFDK YVHKKTTVQE FLKQYEAILQ DRYEEEAKAD SDTWNKQPTL 420 RSPSPLEKSV SGVYTHAVFK KFQVEVLGAV ACHPKREGQD ETTITFRVQD FEKNQDFIVT 480 WNEMKTEVSC LCCLFEYKGY LCRHALIVLQ ICGLSAIPAQ YILKRWTKDV KNRHLVGEES 540 DHGLSRVQKF NDLCQRAMKV IEEGSLSQES YSVACRALEE AFGNCVSVNN SSKSLIEAGT 600 SSVTHGLLCI EDDSQNRSMG KTNKKKNPTK KRKVNSEPDV MTVGAQDSLQ QMDKLNPRAV 660 TLDGYYGAPQ SVQGMVQLNL MAPTRDNYYG NQQTIQGLGQ LNSIAPSHDG YYSAQQSMHG 720 LGQMDFFRTA GGFTYGMRDD PNVRTAPLHD DASRHA

Sequence ? help Back to Top

Protein Sequence Length: 756 aa Download sequence

MLESHVLGSQ DEKEIGISVF LSENIENKLG AKLKDLRIGH SLNPLACAII FPSLRSKLSP  60
SPPPSSICNT QRESQSVILS FKIRWEVILV PYIVLQTSKM IFSDNNQLKL NNLTMDIDLR  120
LPSGEPDKED EEPHGIDNML EHEEKLQNGD IENGNIVDVR DEVHAEDGGD LNSPTADMVV  180
FKEDTNLEPL FGMEFASHGE AYSFYQEYAR SMGFNTAIQN SRRSKTSREF IDAKFACSRY  240
GTKREYDKSY NRPRARQNKQ DPENATGRRS CSKTDCKASM HVKRRPDGKW VIHNFVKEHN  300
HELLPAQAVS EQTRKMSSTN EEFEKRWWKI LEKFELKDDE WTQSLYEDRK QWVPTYMRDV  360
CLAGMSAVQR SESVNSFFDK YVHKKTTVQE FLKQYEAILQ DRYEEEAKAD SDTWNKQPTL  420
RSPSPLEKSV SGVYTHAVFK KFQVEVLGAV ACHPKREGQD ETTITFRVQD FEKNQDFIVT  480
WNEMKTEVSC LCCLFEYKGY LCRHALIVLQ ICGLSAIPAQ YILKRWTKDV KNRHLVGEES  540
DHGLSRVQKF NDLCQRAMKV IEEGSLSQES YSVACRALEE AFGNCVSVNN SSKSLIEAGT  600
SSVTHGLLCI EDDSQNRSMG KTNKKKNPTK KRKVNSEPDV MTVGAQDSLQ QMDKLNPRAV  660
TLDGYYGAPQ SVQGMVQLNL MAPTRDNYYG NQQTIQGLGQ LNSIAPSHDG YYSAQQSMHG  720
LGQMDFFRTA GGFTYGMRDD PNVRTAPLHD DASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein