PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g626720.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 1374aa MW: 155137 Da PI: 6.4064

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g626720.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.8e-24	753	844	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke +w+v+++++ HnHel Pd.00g626720.m01 753 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYRSGFNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVMQWYVSQFSNVHNHELL 844 69******************8888.**************************************998766779***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1374 aa Download sequence
MVRCFLLFTP SHPCRRVPRR SNHAFSTFTA SSPVVSDPPP PHASLFFKSQ NPTPPLIPLQ 60 SSFDQYESSQ PQLKAPPFSP HFTHTNNGTY GYLSSRYRDS RTSNDAQSFH LQICKHGFAN 120 DLFLCNTLIN VYVRIGALVE AGKLFEEMPE KNSVTWACLI SGYTQNGMPN EACAHFKQMV 180 SHGFSPSPYA CGSVLRACQE SGPCKLKFGM QIHGLICKTN HASDMVMSNV LMSMYGRCLG 240 SVDDAYHVFC EIEIKNSVSW NSIISVYCQR GDAISAFKLF SSMQKDGSAF SLQPNEYTFG 300 SLITAACSLA HAGLSLLQQI LTRVNKSGIL QDLYVGSALV SGFARFGLID YARKIFEQMS 360 ERNAVSMNGL MVALVRQKRG KEATEVFMEM KGLVGINLDS LVVLLSSFAE FSVLEEGKRK 420 GREVHAYVIG AGLIYRKNEF FEDAVMNFRE MKRSEFLPSN FTLISALSSC ASLGWIILGQ 480 QIHCEALKLG LDLDVSVSNA LLALYSDTGH LSECRNVFCS MQDYDQVSWN SIIGALAGSE 540 ASVLEAVEYF LDMMQSGWEL NRVTFMSILA AVSSLSLPDL GHQIHAVVLK YNAAEDCAIE 600 NALITCYGKC GGMDDCEKIF SRMSERRDEI SWNSMISGYI HNEFLPKAMD LVWFMMQRGQ 660 RLDSFTFATV LSACASVATL ERAHCLAQNN LNHLRATFTG YISWNTSCYE GDDLGSVSSQ 720 HVKSETTPSS SSSEAVFTPY VGQIFKTDDD AFEYYSNFAR KNGFSIRKAR STESQNLGIY 780 RRDFVCYRSG FNQPRKKANV EHPRERKSVR CGCDAKLYLT KEIVDGVMQW YVSQFSNVHN 840 HELLEDDQVR LLPAYRKIQE VDQERILLLS KAGFPVNRIV KVLELEKGVQ PGQLPFIEKD 900 VRNFVRTCKK TVQENDALLN EKRENDMLEL LEACKAMTGR DPDFVYDYTI DENEKVENIA 960 WSFGDSIRAY TIFGDVVAFD TSYRSVTYGL LLGVWFGIDN HGKAIFLGCV LLQDESSHSF 1020 AWALQAFMRF MRGRHPQTIL TDIDSGLRDA IATELPNTKH VLCIWHILSK ISSWFSLPLG 1080 SQYENFKTEF DMLSQLESVE DFEHQWNILV AQFGLVSDKH IALLYSYRAS WTFSYIRSYF 1140 LARTLTAEFS LSLESFLKRI LNGQTCLQVF FEQVSIAANL ENQTREGMQY MHVKTGMPLE 1200 EHARNILTPY AFNVLQHEIV LSVQYATTEM ANGSYLVRHY KKLDGECLVI WMPDDEQIHC 1260 SCKEFEHSGI LCRHSLRVLV VKNYFQLPEK YFLLRWRVES SLVSVDDQNA QISSDDCAQA 1320 FQSLTASLLT ESLISKNRFN YVHNELTSLL EHVRNMPVID ENAANAAANN ISES

Sequence ? help Back to Top

Protein Sequence Length: 1374 aa Download sequence

MVRCFLLFTP SHPCRRVPRR SNHAFSTFTA SSPVVSDPPP PHASLFFKSQ NPTPPLIPLQ  60
SSFDQYESSQ PQLKAPPFSP HFTHTNNGTY GYLSSRYRDS RTSNDAQSFH LQICKHGFAN  120
DLFLCNTLIN VYVRIGALVE AGKLFEEMPE KNSVTWACLI SGYTQNGMPN EACAHFKQMV  180
SHGFSPSPYA CGSVLRACQE SGPCKLKFGM QIHGLICKTN HASDMVMSNV LMSMYGRCLG  240
SVDDAYHVFC EIEIKNSVSW NSIISVYCQR GDAISAFKLF SSMQKDGSAF SLQPNEYTFG  300
SLITAACSLA HAGLSLLQQI LTRVNKSGIL QDLYVGSALV SGFARFGLID YARKIFEQMS  360
ERNAVSMNGL MVALVRQKRG KEATEVFMEM KGLVGINLDS LVVLLSSFAE FSVLEEGKRK  420
GREVHAYVIG AGLIYRKNEF FEDAVMNFRE MKRSEFLPSN FTLISALSSC ASLGWIILGQ  480
QIHCEALKLG LDLDVSVSNA LLALYSDTGH LSECRNVFCS MQDYDQVSWN SIIGALAGSE  540
ASVLEAVEYF LDMMQSGWEL NRVTFMSILA AVSSLSLPDL GHQIHAVVLK YNAAEDCAIE  600
NALITCYGKC GGMDDCEKIF SRMSERRDEI SWNSMISGYI HNEFLPKAMD LVWFMMQRGQ  660
RLDSFTFATV LSACASVATL ERAHCLAQNN LNHLRATFTG YISWNTSCYE GDDLGSVSSQ  720
HVKSETTPSS SSSEAVFTPY VGQIFKTDDD AFEYYSNFAR KNGFSIRKAR STESQNLGIY  780
RRDFVCYRSG FNQPRKKANV EHPRERKSVR CGCDAKLYLT KEIVDGVMQW YVSQFSNVHN  840
HELLEDDQVR LLPAYRKIQE VDQERILLLS KAGFPVNRIV KVLELEKGVQ PGQLPFIEKD  900
VRNFVRTCKK TVQENDALLN EKRENDMLEL LEACKAMTGR DPDFVYDYTI DENEKVENIA  960
WSFGDSIRAY TIFGDVVAFD TSYRSVTYGL LLGVWFGIDN HGKAIFLGCV LLQDESSHSF  1020
AWALQAFMRF MRGRHPQTIL TDIDSGLRDA IATELPNTKH VLCIWHILSK ISSWFSLPLG  1080
SQYENFKTEF DMLSQLESVE DFEHQWNILV AQFGLVSDKH IALLYSYRAS WTFSYIRSYF  1140
LARTLTAEFS LSLESFLKRI LNGQTCLQVF FEQVSIAANL ENQTREGMQY MHVKTGMPLE  1200
EHARNILTPY AFNVLQHEIV LSVQYATTEM ANGSYLVRHY KKLDGECLVI WMPDDEQIHC  1260
SCKEFEHSGI LCRHSLRVLV VKNYFQLPEK YFLLRWRVES SLVSVDDQNA QISSDDCAQA  1320
FQSLTASLLT ESLISKNRFN YVHNELTSLL EHVRNMPVID ENAANAAANN ISES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein