PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g627450.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 194aa    MW: 21308.6 Da    PI: 4.8568
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g627450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.92.8e-144421455
               AP2 14 rWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      r++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Pd.00g627450.m01  4 RFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 42
                      789*****883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MVFRFAAEIR DPWKKTRVWL GTFDSAEDAA RAYDAAARSL RGPKAKTNFP PPTSAADYDI  60
NKNHRLPPHH PSLYDDDTVC DVVQASRPTS SSLSSTVESF SGPRPQPRPT SDAQLQRRPV  120
HPVPPDDCHS DCDSSSSVVD DGDDCVLTSS FRRVSPLPFD LNLPPPPMMD GLDLFKSGEV  180
YGDDHDLQAT ALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-15ERF family protein