PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g627740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 100aa    MW: 12036.8 Da    PI: 10.3784
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g627740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.51.2e-0926602155
                      HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
          Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55
                      k +yps++++  LA+++gL+ +q+ +WF N+R ++
  Pd.00g627740.m01 26 KWPYPSEAQKLALAESTGLDLKQINNWFINQRKRH 60
                      569*****************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MKKKKNGKLP KEARHQLLDW WSRHYKWPYP SEAQKLALAE STGLDLKQIN NWFINQRKRH  60
WKPSEDVQFA VMDPTQPHHH PHFYMDNNLT FPMNSTSTLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62360.11e-44TALE family protein