PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g628680.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 249aa    MW: 26453.8 Da    PI: 8.9076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g628680.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.21.9e-05167205849
                       HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49 
                       r + RR+r+N++f eL ++l +    + +K +K ++L+ A e
  Pd.00g628680.m01 167 RGKLRRNRLNERFLELVSVLDPG---RLPKTDKGATLTDAAE 205
                       6689*****************98...89**********9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MCYVGKATKI FIFVVTVLVV LGLVLGFGVL RHGLQKTHKC SADSDSCNSL SSPPLIFPNP  60
NSTSADLNFK PTSSTDLNSN PTSSGDPNSN PTSARPNSQS AIFSASAGFN GCAAVQSTKA  120
GSGSVASVVH CVEADCSSGD SDNLMEVGSQ KRLRSESYGA SFSKACRGKL RRNRLNERFL  180
ELVSVLDPGR LPKTDKGATL TDAAEKSELR DEKRRQRVEK EKLEQQVIAM STQNGILPHS  240
PAISTAFAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-20bHLH family protein