PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g628890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 239aa    MW: 25930 Da    PI: 9.5598
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g628890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18108158155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr++  +g+WvAeIr p   + r  r +lg+f ta eAa a+++a+++++g
  Pd.00g628890.m01 108 CNYRGVRQRT-WGKWVAEIRAP---N-RgSRLWLGTFPTAIEAALAYDEAARAMYG 158
                       56*****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MKKLKKIKSE LKITIHLGAN WGGGPGAKEG GSLYFLFSTK VNCMTKLVKT DPRQDGSNPV  60
AETLAKWKAY NDHLDSCNDE SKPIRRVPAK GSKKGCMKGK GGPENSRCNY RGVRQRTWGK  120
WVAEIRAPNR GSRLWLGTFP TAIEAALAYD EAARAMYGSA ARLNFPNISI SSLSKDPSSR  180
ATLSAPSLLA TSAGSESSGR SDHSEDCAAQ GKVNYLSPNV ENEDTTTNRD QTNEDGEDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-33ERF family protein