PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g632350.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 202aa    MW: 22757.1 Da    PI: 7.7687
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g632350.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.000122850123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y+C+ C++ Fs+   L  H++ H
  Pd.00g632350.m01 28 YECTFCKRGFSNAQALGGHMNIH 50
                      99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MESDQAIQEN SEQVSDDKQG ASQAAKSYEC TFCKRGFSNA QALGGHMNIH RKDKAKLKQV  60
SSSNTIETKQ HQQQQRLLDI PKMPSSYSSP ILPTINSSEH NKLKPSHDAE RNTSTWPWFL  120
NKEGDATMRH NIDPNHLSQV QQQLPLFSQA PSQARVHDNP GLRQVHGDQD LQPSASELDL  180
ELRLGPERQD SSSKANTTRK FF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.15e-17C2H2 family protein