PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g632800.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 105aa    MW: 12164.8 Da    PI: 9.2225
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g632800.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.54.6e-2331103174
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74 
                       +fYneY++++GFs+r+++++k+k++g+i++r fvC keg+r ++k++   ++++raetrtgC+ak+ +k++k++
  Pd.00g632800.m01  31 EFYNEYGRRAGFSIRRDSHNKNKNTGQIISRVFVCCKEGFRPKDKRD-YLTKSSRAETRTGCNAKMSIKLNKSN 103
                       6******************************************9999.9999******************9855 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MKDPVATICE DNLDYKPICD MEFLSEQAAY EFYNEYGRRA GFSIRRDSHN KNKNTGQIIS  60
RVFVCCKEGF RPKDKRDYLT KSSRAETRTG CNAKMSIKLN KSNGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-18FAR1 family protein