PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g633620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 236aa    MW: 26642.8 Da    PI: 7.8009
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g633620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92e-173984148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg++T++E+ l ++++ ++G++ W++Iar+++ gRt++++k++w++++
  Pd.00g633620.m01 39 RGKMTPQEERLVLELHSKWGNR-WSRIARKLP-GRTDNEIKNYWRTLM 84
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDRARGLQPG GGREIIGLNR TGKSCRLRWV NYLHPGLKRG KMTPQEERLV LELHSKWGNR  60
WSRIARKLPG RTDNEIKNYW RTLMRKKAQE KKRAASPSSS SSNCSSSSNI TSTEGGASFY  120
DTGGLEIKAS SGAKKTGGDH QEQEDDKKRD QKEYSLDDIW KDINLPEVNS IEPVYNGYSE  180
EACNIISCPL MASPAPWEYC SDSLWEMDEE ESKMFLPTTS DHFLSCFEYG KSSLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.42e-75MYB_related family protein