PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g634360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 360aa MW: 40385.7 Da PI: 4.7218

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g634360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80	5.1e-25	10	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lp+Gf+F+P+d++l+ +yL +kv+g+++ e+vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r r++ sg+Wk + Pd.00g634360.m01 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYENVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRVARTIGSGTWKGETS 102 79***********************99999**99568*742444222366799**********************9999 PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v + ++++ g+ k + + + ++ + W+mhey+l Pd.00g634360.m01 103 GTTVSDPknEENHLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142 99999885566669999998886..566667999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MAPCASVVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE 60 YGGHNLAKGE DLYFFTKLKS LSDKDSRVAR TIGSGTWKGE TSGTTVSDPK NEENHLGIWK 120 RFHYENPKSV QDGCWIMHEY SLHPSLVKLK PNSTNQFVLC RIRKNDKGKR KLRTAEEENE 180 TDTPVQSQNK RQRPQQVTSF EELIGNCTPV SEATGVGGSV SYLPTELTQS QPDSSFAYPT 240 TVVSSQARAN YTDEVSQFHS GGDGDALMSD FSHLDTAQPF TEQALGSYTV CNQEKASDVY 300 ETQQDLGLTD NNIGHWPSPF GSEEDQVNAL DFSIDYELLI HLINCDDGPS QSSTAQFMGM

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MAPCASVVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRVAR TIGSGTWKGE TSGTTVSDPK NEENHLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKLK PNSTNQFVLC RIRKNDKGKR KLRTAEEENE  180
TDTPVQSQNK RQRPQQVTSF EELIGNCTPV SEATGVGGSV SYLPTELTQS QPDSSFAYPT  240
TVVSSQARAN YTDEVSQFHS GGDGDALMSD FSHLDTAQPF TEQALGSYTV CNQEKASDVY  300
ETQQDLGLTD NNIGHWPSPF GSEEDQVNAL DFSIDYELLI HLINCDDGPS QSSTAQFMGM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	2e-17	NAC family protein