PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g636010.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 299aa    MW: 32893.5 Da    PI: 4.9626
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g636010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.63e-102232631055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  Pd.00g636010.m01 223 RKRREKINERLRVLQNLVPNG-----TKVDISTMLEEAVHYVKFLQ 263
                       9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MEHIGVVAEG EWTSLSGMYT AEEVDFMAQL LGNFSSSNHP SGTSSMRVPD TFWPGDESLT  60
MNMSGNHEVN DQCLNQEPSE GNAEEYGGNQ PESVALGKRR YDMAVQEPAM DDKSNTSKDS  120
MKITQSAENM NKRNIKSKKS LQIITSNNEE DGNAGPNRQS SSSCCSGDDS NIALHSHENS  180
QELSPGSTST SSLSPKEASA LNLSGKSRAR RGLAIDPQSL YARKRREKIN ERLRVLQNLV  240
PNGTKVDIST MLEEAVHYVK FLQLQIKLLS SDDMWMYAPI CYNGMDLGLD LKLTSPKQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223228RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.16e-58bHLH family protein