PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g638850.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 201aa MW: 22583.6 Da PI: 8.9887

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g638850.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	104.1	2.3e-32	55	136	3	73
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssa..sec 73 k+drhski T++g+RdRR+Rls+e+a++fF Lqd L fdk+skt+eWLl qa p+ik+l+g+ s+s+a ++c Pd.00g638850.m01 55 CKRDRHSKINTARGLRDRRMRLSLEVARKFFWLQDALHFDKASKTVEWLLIQATPEIKKLVGDckhmmsstkSTSPAtsESC 136 69*************************************************************7777665442222221222 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MREAVAANNT LADDHRQTTT TSATLNIKMV DWDSNKNHGE MMNMDQPQIP RRRSCKRDRH 60 SKINTARGLR DRRMRLSLEV ARKFFWLQDA LHFDKASKTV EWLLIQATPE IKKLVGDCKH 120 MMSSTKSTSP ATSESCEVIS GIDEAATNTN IHINIDGGND GDDKLIQSCE IQPSAKERKV 180 QVPLRPVPAG YPNPATLTRS D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	2e-24	TCP family protein