PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g640100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 393aa    MW: 43321.6 Da    PI: 7.1311
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g640100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.000741940223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      +C +C+k+F+++  L  H++ H
  Pd.00g640100.m01 19 QCLYCKKVFKNHQALGGHLSAH 40
                      7**************9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MNFLLTPDKG KEEKHVGVQC LYCKKVFKNH QALGGHLSAH QEEIDSKRSW NYPSHFSNSV  60
SSTNNSPQPF SMRHPEIFSG GPLSSEVTPP LDFSKRLYSN ENSWVNISRF YENNTSAMPP  120
KCSSSSGHAE IQNSKPLSFI APAPSGSMIP ISVPLDPPFC LVSNGVCQFN TDQFRSFRDG  180
MPSFSANAMP YFQDHNCGMI PYPVNAVTDL HPDLSSKQSF CFKEPIAIGS LPPDPSESSG  240
QGEIGRYKTQ TVSTSKGRKK HCIGGARGSA AEIMNPSKRP KKNSELLMET DKPPHPSQSS  300
DQGEIGQYET QILLTSKGGK RHCLGEAGGR AEMMNCQWKR PEINSELSME TDKPPKRELL  360
LFKDVENCFS RAGISSNAGE EEGQMDLDLS LHL