PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g647520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 349aa    MW: 39646.4 Da    PI: 9.5085
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g647520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.89.3e-14108192899
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        d ++++ l++p  f+++++g      + t++ ++g+   v+l  ++++++ ++ k+W +Fvk++ +++ Df++F +dg sef   v++++k
  Pd.00g647520.m01 108 DDDFSKH-LRIPPAFIKNFNGRR--LGKCTMRGPTGKCCAVEL--EQRRDGLFFHKCWPGFVKDHFIESEDFLIFDYDGGSEF--DVTIYDK 192
                       4666666.********8887774..348***************..*********************************98998..8888876 PP
2B333.29.1e-11230324298
                       EEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                        k+++p d  +   l +pk+ a +      +g+   + t++l+d++grsW v+l +  ++gr  +++ W+   + n++  gD+++F++++  +
  Pd.00g647520.m01 230 TKTFKPRDLYS---LLIPKSIAVTEglmssEGV-LIKETIMLQDQTGRSWLVQL-HVTCDGRLEMKREWRTCRDTNQISHGDTIIFEFVK--Q 315
                       56665555554...6899999988877665333.35679***************.678888899***********************765..6 PP

                       E..EEEEE- CS
                B3  90 felvvkvfr 98 
                       +  ++++fr
  Pd.00g647520.m01 316 GVILIHIFR 324
                       777999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MSRLQTRWSR GYGFFKFQKA KAEGEETSAS QPQRTSRRST PSEVVSHLKG NLGPSTSSPG  60
AEQSLVELGR VWWAPISERL LIIHFRFQMD KKLKCPLERP SFRVFLVDDD FSKHLRIPPA  120
FIKNFNGRRL GKCTMRGPTG KCCAVELEQR RDGLFFHKCW PGFVKDHFIE SEDFLIFDYD  180
GGSEFDVTIY DKTCCEKDVK AAAKRHASDH LAETSTGGPI SFRSENACFT KTFKPRDLYS  240
LLIPKSIAVT EGLMSSEGVL IKETIMLQDQ TGRSWLVQLH VTCDGRLEMK REWRTCRDTN  300
QISHGDTIIF EFVKQGVILI HIFRGRGEGN SSSVVVLSGV LPRKSSQRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.14e-15B3 family protein