PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g647540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 177aa    MW: 19913.9 Da    PI: 9.8502
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g647540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.72.8e-10411131591
                       -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                         +lp  f+++ +++k    + ++  +   sW v++   ++ ++   +++GW+eF + +gLk g++++Fk++g++ f+
  Pd.00g647540.m01  41 FSSLPVAFCSSLSENKLD--KAVI-KSCLGSWLVRV--GRTVDGvLSFEEGWEEFLNHHGLKLGEILIFKHNGKRAFN 113
                       458999999988766433..3444.456689*****..666666599***********************98877663 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MPFRALVAQR QKLQAFRSLR SVLCTQSTSS GQRHQWCFRH FSSLPVAFCS SLSENKLDKA  60
VIKSCLGSWL VRVGRTVDGV LSFEEGWEEF LNHHGLKLGE ILIFKHNGKR AFNVVAYEAH  120
GSEKVYDSKG GSKVTFFLCI SHVALHLLVA GSLDYFQEKA LQKQLHPQPQ GLCSHAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-09B3 family protein