PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g647570.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 360aa    MW: 41053.8 Da    PI: 8.9678
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g647570.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.91.4e-16116200899
                       -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        d ++++ l++p  f+++++g      + t++ ++g+ W v+l  +++++  ++ kGW +Fvk++ +++ Df++F +dg sef   v++++k
  Pd.00g647570.m01 116 DDDFSKH-LRIPPAFIKNFNGRR--LGKCTMRGPTGKCWAVEL--EQRRDDLFFHKGWPGFVKDHFIESEDFLIFDYDGGSEF--DVTIYDK 200
                       4666666.********8887774..348***************..9********************************98998..8888876 PP
2B334.63.3e-11237332198
                       EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                       f k+++p d  +   l +pk+ a +      +g+   + t++l+d++grsW v+l +  ++gr  +++ W+   + n++  gD++vF++++  
  Pd.00g647570.m01 237 FTKTFKPRDLYS---LFIPKSIAVTEglmssEGV-LIKETIMLQDQTGRSWLVQL-HVTCDGRLEMKREWRTCRDTNQISHGDTIVFEFVK-- 322
                       666776666665...5699999988877765333.35679***************.678888899***********************765.. PP

                       EE..EEEEE- CS
                B3  89 efelvvkvfr 98 
                       ++  ++++fr
  Pd.00g647570.m01 323 QGVILIHIFR 332
                       6777999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MSRLQTRWSR GYGFFKFQKA KAEGEETSAS QPQRTSRRST PSGSETFFGF RGCEPFEGEF  60
GSFNIAPGAE QSLVELGRVW WAPISERLLI IHFRFQMDKK LKCPLERPSF RVFLVDDDFS  120
KHLRIPPAFI KNFNGRRLGK CTMRGPTGKC WAVELEQRRD DLFFHKGWPG FVKDHFIESE  180
DFLIFDYDGG SEFDVTIYDK TCCEKDVKAA AKRHASDHLA ETSTGGPISF RSENACFTKT  240
FKPRDLYSLF IPKSIAVTEG LMSSEGVLIK ETIMLQDQTG RSWLVQLHVT CDGRLEMKRE  300
WRTCRDTNQI SHGDTIVFEF VKQGVILIHI FRGRGEGNSS SVVVLSGVLP RKSSQRPIAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.14e-16B3 family protein