PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g647610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 233aa    MW: 25848.8 Da    PI: 10.6117
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g647610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.32.4e-1215911091
                      HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91
                       + + rl+lp  f+++ +++k    + ++  +   sW v++   ++ ++   +++GW+eFv+ +gLk g++++Fk++g++ f+
  Pd.00g647610.m01 15 GF-NTRLSLPVAFCSSLSENKLD--KAVI-KSCLGSWLVRV--GRTVDGvLSFEEGWEEFVNHHGLKLGEILIFKHNGKRAFN 91
                      44.457********999766433..3444.556689*****..666666599***********************98876663 PP
2B353.44.5e-171372121385
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTE.....EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgr.....yvltkGWkeFvkangLkegDfvvFkld 85 
                       ++ l++p +fa+++g++ ++   ++l+d+sgrsW + l+     +    r      + t+GW +F +a++Lk gD+++F l+
  Pd.00g647610.m01 137 KAYLTIPARFARSNGMVATS--RIILKDPSGRSWPLILSRwesiS----RgshhiAIRTNGWYKFYEAKKLKNGDVCTFNLK 212
                       3779***********99766..6***************7646433....2234456778********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MAVKCSKFFK FLAPGFNTRL SLPVAFCSSL SENKLDKAVI KSCLGSWLVR VGRTVDGVLS  60
FEEGWEEFVN HHGLKLGEIL IFKHNGKRAF NVVAYEAHGS EKVYDSKGKS PSEATASSTS  120
RTLFACTMKK SHGDPHKAYL TIPARFARSN GMVATSRIIL KDPSGRSWPL ILSRWESISR  180
GSHHIAIRTN GWYKFYEAKK LKNGDVCTFN LKPVSSKSGS KSARVMDVQI TRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.16e-21B3 family protein