PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g649240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 288aa    MW: 32608.6 Da    PI: 5.4838
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g649240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.93e-151470148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.........TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.........kgRtlkqcksrwqkyl 48
                      +g+WT+ Ed++l+d+vk +G g+W + +r+ g         ++R++k+c++rw++yl
  Pd.00g649240.m01 14 KGAWTALEDQILIDYVKDHGEGRWGKLSRETGeptltlrtsLKRCGKSCRLRWLNYL 70
                      79*****************************************************97 PP
2Myb_DNA-binding51.81.9e-1676120147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++
  Pd.00g649240.m01  76 RGNITEDEEDLIIRLHKLLGNR-WTLIAGRLP-GRTDNEIKNYWNSV 120
                       7999******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MGRSYRCDKD GLSKGAWTAL EDQILIDYVK DHGEGRWGKL SRETGEPTLT LRTSLKRCGK  60
SCRLRWLNYL RPEIKRGNIT EDEEDLIIRL HKLLGNRWTL IAGRLPGRTD NEIKNYWNSV  120
LRKKAQESHS ERSRNEWKTT KDTEKAVPSL KMDSHFIQNG LTPTSCINNE LLGTTNTLAE  180
PFISGVEATN MEVKSDSSDG FLPITRENDM TWNFIRDLNA GELGISEFLH TDFSKLCELN  240
TTIFDCTSGC RNGSLMSTST AEAPLNLQEW LNDWAADDNC LPEAAFGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.14e-53MYB family protein