PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g649470.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 163aa    MW: 18678.4 Da    PI: 4.9508
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g649470.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1017.2e-32103161159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver+++dp++v++tYeg Hnh 
  Pd.00g649470.m01 103 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPRFVITTYEGIHNHM 161
                       59********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MSNSNNFRAQ ESPENDFSDQ SNFEFSEYLM IGEWLDEDHP TSMALGTVQN SGYQANEVDE  60
SRGSSSQLGG SNSTGENESG SVRERQEVRE RVAFKTKSEV EILDDGFKWR KYGKKMVKNS  120
PNPRNYYKCS VEGCPVKKRV ERDRDDPRFV ITTYEGIHNH MSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.17e-50WRKY family protein