PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g650300.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 207aa    MW: 22350.8 Da    PI: 7.0813
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g650300.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.95.4e-092262046
                      TTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46
                      G++ W+ Ia++m  gRt++++k++w++
  Pd.00g650300.m01  2 GSR-WSVIASRMS-GRTDNDVKNYWNT 26
                      788.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MGSRWSVIAS RMSGRTDNDV KNYWNTKLKK KLFGGKQNLT TKNCKEPTNN ATLPGSAASL  60
ALPCVPKAEP QDSAFSTFQT QIPATLHMLT DVNSGLNACN QTWTLNSPDQ LYSSKVMAFS  120
DFRASSKKSY TTVSLSQDGS NISDSSSIAA VDKCASLPGN GSLDDSGMFT DFGLPYDVNY  180
GMWFGEKTSE FGPASCTNFG DLFSNSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.14e-14MYB family protein