PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g651000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 273aa    MW: 28638.8 Da    PI: 8.8785
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g651000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00032112134123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ykC+ C+k F++   L  H  +H
  Pd.00g651000.m01 112 YKCSVCNKAFPSYQALGGHKASH 134
                       9***********99999998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MALQALNSPT TAGASPFRFE EAASKINYVE PWTKRKRSKR PRLDSPSAEE EYLAICLIML  60
ARGGSGSTSA ATTATATTAT NSAASHHMIT QSPSNASHQE PSTSAQPAKL SYKCSVCNKA  120
FPSYQALGGH KASHRKGAAG SASEGPSTSS NTTTSGTTTV TASGRTHECS ICHKSFPTGQ  180
ALGGHKRCHY EGGVGASTAT APATTTSAVT SSEGVGSTSH HAHRETFDLN MPALPEFSRD  240
FFLCGEDEVE SPHPAKKPRI LTIMKPKQEI SQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-46C2H2 family protein