PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g653770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 258aa    MW: 28566 Da    PI: 9.8452
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g653770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.3e-18841134
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                      Cs C tt+TplWR gp g+k+LCnaCG+++rk+g
  Pd.00g653770.m01  8 CSDCMTTETPLWRGGPAGPKSLCNACGIRHRKRG 41
                      ********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MNGNKKRCSD CMTTETPLWR GGPAGPKSLC NACGIRHRKR GIPTNKDLAS LVTVIVFDTE  60
TTGFSRERDH IIEIALQDLE GGENSAFQTL VNPERRVLNS HIHGITTNMV NRPDVPRIED  120
LIPILLKYVK SRQKPGGCVL FVAHNARTFD VPFLCNAFRR CGVDIPSDWL FKDTLPMGRE  180
AMKSEGSKPS SRSISLQALR EHLGIPLDGS AHRAMSDVKV LAAVFQRLTY MLKLPLASLV  240
EDAFTASEIG TPKKKSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.11e-17GATA family protein