PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g657020.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GeBP
Protein Properties Length: 197aa    MW: 22832.7 Da    PI: 8.1884
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g657020.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57361.32.4e-192821698
            DUF573 16 LqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiWgs 98
                       +G+i+f +k    ++ d ++fy+ ++k i+++vs+ q+ +K+ rLKkK+++++++   +g++p+fsk+h+qk f+lsk+ Wgs
  Pd.00g657020.m01  2 VKGIISFLKK---FSTFDGKKFYNWINKYIEADVSRGQIADKVCRLKKKYRNNEANrGPNGEDPVFSKPHEQKLFDLSKQAWGS 82
                      5788888333...346699********************************99988689***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MVKGIISFLK KFSTFDGKKF YNWINKYIEA DVSRGQIADK VCRLKKKYRN NEANRGPNGE  60
DPVFSKPHEQ KLFDLSKQAW GSTSCTTNRT NTNADINDGI VEEGANDAQK KATDVVDDDI  120
LQEKEVLFDD NLVMEAFDKY LTSRGLDLRW FGQDKLESLE NKWRKIRVAE STFRLLQAKF  180
DAKVHQIALH AYNFFDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.11e-12GeBP family protein