PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g661650.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 189aa    MW: 21105.8 Da    PI: 5.357
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g661650.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP68.48.7e-2283151164
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliekkek 64 
                       r+eksL lltq+f+kl+ +s+e++++l++v++ L+ +      +++k+R iYDi+NVL+++nliek++ 
  Pd.00g661650.m01  83 RREKSLALLTQNFVKLFVCSTEEMISLDDVTELLLGDaqsasAMRTKVRGIYDIANVLSSMNLIEKTHT 151
                       689***************************************************************543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MSYLFLHQPK NQYYWKGFGA IRNALQELRE EGMRENCINF VASDDAKVSD DKDDEERCGS  60
QLNDKSNPTV NPQPPADQKT DNRREKSLAL LTQNFVKLFV CSTEEMISLD DVTELLLGDA  120
QSASAMRTKV RGIYDIANVL SSMNLIEKTH TADTRKLAFK CFHPVADARI ATRGVTKIVA  180
ATETAGGEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.17e-48E2F/DP family protein