PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g662530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 505aa    MW: 57061.4 Da    PI: 7.3574
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g662530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR186.15.4e-2792180291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       fYn+YA ++GF++r++  ++s+ +g+i+ rt+vC+keg+r  +k++ + + r+r+ tr+gCka++ vkk + gkw+v+k+++eH+H+l+p
  Pd.00g662530.m01  92 FYNAYALRIGFRTRVNDLSRSRVDGSIIARTLVCNKEGYRVADKRE-RMSVRPRPPTRVGCKAMISVKKLSIGKWVVAKFVKEHTHTLSP 180
                       9*****************************************9999.999*************************************986 PP
2FAR187.71.7e-27336423290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fYn+Y+ +vGF +r+++  +sk +g+i+ rtfvC+keg+r++++++ +++ ++ra tr+gCka+l +kk + gkw+vt++ +eH+H+l+
  Pd.00g662530.m01 336 FYNAYGMRVGFMTRMNYLARSKYDGTIIGRTFVCNKEGYRKPDRRD-KTTIKPRAPTRVGCKAMLSIKKISIGKWVVTRFMKEHTHALT 423
                       9******************************************999.999************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    
MYTTGRLYRR SIMDSVLDTE AQNGVLDNSA DVELRLNHDG AILATCVVEE ASSLGQIEQV  60
GQNSSRVEQN AVEGDEPYLG QEFDSEAAAH AFYNAYALRI GFRTRVNDLS RSRVDGSIIA  120
RTLVCNKEGY RVADKRERMS VRPRPPTRVG CKAMISVKKL SIGKWVVAKF VKEHTHTLSP  180
GKGKKGSNDQ STTDEQMKIK ELTQQLLVER KRSASYRKII DLLFNHIEEH TQNLSQKIQR  240
ITDNLQEIVS SDLDSELDKN INDGVLNDSS DAELKHSNDG ALVGSFVEVE EMSHLGQGQD  300
DEVTQNPCKD GSSVVVEADE PYVGQEFDTE ETAQAFYNAY GMRVGFMTRM NYLARSKYDG  360
TIIGRTFVCN KEGYRKPDRR DKTTIKPRAP TRVGCKAMLS IKKISIGKWV VTRFMKEHTH  420
ALTATANKGQ KGLIADQVPD DKTKIEELTR ELFLERKRSA SLREIVDLLF DHIEEHTQDL  480
SKKVQYVVDK VKEIESEGKK RYNLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.27e-64FAR1 family protein