PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g662670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 203aa    MW: 22588.4 Da    PI: 8.1658
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g662670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260146.29.3e-46121111100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrrkC+++Cv+apyfp +qp+kfanvhk+FGasnv+kll++l++++reda++sl+yeA++r+rdPvyG+vgvi+ lq+ql+ql+ +
  Pd.00g662670.m01  12 PCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMD 104
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       l  +k+e
  Pd.00g662670.m01 105 LTCAKSE 111
                       *999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MMASSSSSSN SPCAACKFLR RKCQPECVFA PYFPPDQPQK FANVHKVFGA SNVTKLLNEL  60
HPHQREDAVN SLAYEADMRL RDPVYGCVGV ISLLQHQLRQ LQMDLTCAKS ELSKYQNLQH  120
GLTASHGGGG RDHYPHQFFP RDRDHQHQQQ MMIRSFDAGN NYDASLLAMN VSAAAGGIHG  180
QLTHQFQQPR AAAGDDRRAI DPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65620.31e-74LBD family protein