PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g664540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 252aa    MW: 28218.9 Da    PI: 8.9545
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g664540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-1955105256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  Pd.00g664540.m01  55 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 105
                       59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MDTMQDIYLH QRDLLQKFSD ESRANAAVSR FFQKNPVQSS ACSSTTYMAP CKKKLYRGVR  60
QRHWGKWVAE IRLPQNRMRV WLGTYDTAEA AAYAYDRAAY KLRGEYARLN FPNLKDPSKM  120
GFGDCARLNA VKTSVDAKIQ AICQKVKRER AKKNAKKSSN SSENEKAVMK VDSSPSSSGF  180
GDGSGQELVS LTATPTATPT VSEDGVWRCE NSPPSISTEW PMGMAEDLEF EGCSLARMPS  240
YDPELIWEVL AN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.15e-40ERF family protein