PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g666840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 200aa    MW: 22343.2 Da    PI: 6.6249
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g666840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.23.2e-0690109120
                       EEETTTTEEESSHHHHHHHH CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                       ++Cp C+k+F+r  n++ H+
  Pd.00g666840.m01  90 FSCPVCSKTFNRYNNMQMHM 109
                       89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MQTPSTTTTT TDVGTSATSF LEADEDQDEE SIFLSLGPPG QVALHIGPPS SGSTINSSIG  60
NPNHNHIGAP IEGQYWIPSP AQILVGPTQF SCPVCSKTFN RYNNMQMHMW GHGSQYRKDK  120
ASFISAETSM LLLRRGVQEQ HRAPKVKATQ RLQDTADTLQ KKTWVQAIWV PQMWEAICGE  180
RRLEDSREEL RQALVLHLWV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.15e-30C2H2 family protein