PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g667410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 209aa    MW: 23686.4 Da    PI: 6.0835
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g667410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.9e-0895142455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN+++  L+ l+P +     k +  a +L  ++ Y++sLq
  Pd.00g667410.m01  95 SHSLAERVRREKINERLRCLQNLVPGC----YKTMGMAVMLDVVISYVQSLQ 142
                       8*************************8....355888999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MELIDNLCEL ENLSANHHEI MALSNGMSFS DHQRQTNQLP LNFIHDNIQS FSHSDDPNHD  60
PLGGRKRKRN NIDKDGEKLK EVIHVRAKRG QATDSHSLAE RVRREKINER LRCLQNLVPG  120
CYKTMGMAVM LDVVISYVQS LQNQIEFLSM KLSAASVYYD FNSPGVDALD TMQQQGTNNA  180
YGEVQEEMVR SEGYGGGLSN YNNNSTWPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.15e-51bHLH family protein