PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g673450.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 164aa    MW: 19055.6 Da    PI: 5.384
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g673450.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.93.6e-13871631798
                       E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                        +p +f +++  +  +++t++l     r W v+l    +++ y +++GW  F kan LkegD+++F+l+++++  l v +fr
  Pd.00g673450.m01  87 HVPASFRKHFTPV--KNQTVRLLV-GDRLWPVTL--IFHPQNYRFSAGWGAFEKANWLKEGDICIFELMDKKNLVLEVNIFR 163
                       5788886555544..455788776.679******..66777799************************99999999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MPQIEGTDEE EDDDMSVEEI WEIEDDEEDN DKFVESLEIE TDEKKNRRKP RSSSKPSSLR  60
ATVKAANKFV ASHPFFKITL GPSRKAHVPA SFRKHFTPVK NQTVRLLVGD RLWPVTLIFH  120
PQNYRFSAGW GAFEKANWLK EGDICIFELM DKKNLVLEVN IFRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.16e-18B3 family protein