PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g674740.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 170aa    MW: 19757.2 Da    PI: 5.3372
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g674740.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.43.2e-089312346
                      -HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqk 46
                      +W++Ia +++ gRt++++k++w++
  Pd.00g674740.m01  9 RWSLIAGRLP-GRTANDVKNFWNT 31
                      5*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEPGFSTFRW SLIAGRLPGR TANDVKNFWN TRLGRKMASV VVEKVKEKSP ETKKDIAVRP  60
QSRRLSKTSH YLSGHKTVTS RHNQPEENFS KLPILPSSPI EDEVDWWETL LEDEDNVQRT  120
KCSCLLLEED HFTNCCVEDF AQWTITDFRY LEDCPCWIGS SDMDLWNLST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09460.14e-12MYB family protein