PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g679090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 222aa    MW: 25560.8 Da    PI: 4.6671
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g679090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM97.22.5e-30391623128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp+   k+  + +e ++F+ +++       ++r+tksgyW   g+++ev
  Pd.00g679090.m01  39 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYDHDPDELPNgdfKHGLDCNEAFYFAYTEQ------MTRRTTKSGYWDLDGEEEEV 125
                       7*********************************************544444446679999998766......5789**************** PP

               NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + + ++ +vg  k++vf+kg+ap+g +td +mheyr+
  Pd.00g679090.m01 126 KYRnGDITVGFEKVMVFHKGTAPNGIETDFIMHEYRV 162
                       99856677***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MALPSPQSTS QVPETEKDFD LLKCSKIENG KKEADIHLVG YRFDPSEDQI VVFYLFNKIL  60
GRELPINDII KEISVYDHDP DELPNGDFKH GLDCNEAFYF AYTEQMTRRT TKSGYWDLDG  120
EEEEVKYRNG DITVGFEKVM VFHKGTAPNG IETDFIMHEY RVNPLIVPTH VLNDSIRAKI  180
ERYVVCRIIH EGVSNFPLTN FHQDGLLGLL KKQNQDDMTE IA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.19e-27NAC family protein