PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g681890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 230aa    MW: 25872.9 Da    PI: 6.0302
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g681890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.4e-08116163455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++iN+++  L+ l+P +     k +  a +L  ++ Y++sLq
  Pd.00g681890.m01 116 SHSLAERVRREKINERLRCLQNLVPGC----YKTMGMAVMLDVVISYVQSLQ 163
                       8*************************8....355888999999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MELIDNLCEL ENLSANHHEI MALSNGMSFS DHQRQTNQLP LNFIHDNIQS FSHSDDPNHD  60
VLVAHSTSLT GDFAQESEKG KPLGGRKRKR NNIDKDGEKL KEVIHVRAKR GQATDSHSLA  120
ERVRREKINE RLRCLQNLVP GCYKTMGMAV MLDVVISYVQ SLQNQIEFLS MKLSAASVYY  180
DFNSPGVDAL DTMQQQGTNN AYGEVQEEMV RSEGYGGGLS NYNNNSTWPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-51bHLH family protein