PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g685590.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 180aa    MW: 20734.6 Da    PI: 5.3717
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g685590.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.71.3e-2491401128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykveP..wdLpkkvkaeekewyfFskrdkkyatgkrknratksgy..Wkatgkd 89 
                       lp+G+rF+P++eel+ +yL +kv+  +l+  +++ e+d+y  e   ++L    +++e+++yfF++ +kk+ +g+r +r+ + g   W+++ + 
  Pd.00g685590.m01   9 LPVGCRFEPSEEELLAHYLYNKVNCLPLSS-NAVIECDLYGEEEiwRKLF--DETGETSLYFFTELKKKTGKGSRIERMSSGGCvtWRNQSN- 97 
                       799************************999.778899**98864213443..34578899******************88877556*98876. PP

               NAM  90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       k+++++    +++++g k+++ +  +++++  k +Wvmhe+rl
  Pd.00g685590.m01  98 KAIYVNddepNKTVIGYKRMFSYVPKKTSTKAKGEWVMHEFRL 140
                       67777657878888**********99999999*********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
METARSPGLP VGCRFEPSEE ELLAHYLYNK VNCLPLSSNA VIECDLYGEE EIWRKLFDET  60
GETSLYFFTE LKKKTGKGSR IERMSSGGCV TWRNQSNKAI YVNDDEPNKT VIGYKRMFSY  120
VPKKTSTKAK GEWVMHEFRL AGCLVNNNNE VSNSFQSCII IFGSFWFFEC DFLEFSLFSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.24e-18NAC family protein