PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g686740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 435aa MW: 46672.7 Da PI: 9.605

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g686740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.3e-05	195	217	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +C+ Cg+ F+ ++L++H+ H Pd.00g686740.m01 195 VCSQCGEIFPKMDSLEHHQAIrH 217 8******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MALLTFVPEA TEPKNKKKAP PPSKRTQKQS SSSKKQQNPP SSSSSSSSWD QIKNLLTCKQ 60 IEGSRVHDPS KNHNIVNGGA GAAAAGYSKL GSSCSSICSF RDVVHGNTRV VHRADNSPES 120 SSLGQETGLL GRKQVTRSRS SSSRSNATGT GAAYNTTSAS SSSRGMQFRK LSGCYECHMI 180 VDPSRYPIPR SSVCVCSQCG EIFPKMDSLE HHQAIRHAVS ELGVEDSGRN IVEIIFKSSW 240 QKKDIPICKI ERILKVHNTQ RTIQRFEDCR DVVKNRALGT TRKNPRCAAD GNELLRFHCA 300 SISCTLGARG SSSLCGSVPG CGVCTIIRHG FQGKAGGEGG KGVRTTASSG RAHDSLSCTD 360 GRRAMLVCRV IAGRVRRIAD DAPTEEDALS SLSAPGSYDS VAGFAGIYSN LEELVVYNPR 420 AILPCFVVIY KALES

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MALLTFVPEA TEPKNKKKAP PPSKRTQKQS SSSKKQQNPP SSSSSSSSWD QIKNLLTCKQ  60
IEGSRVHDPS KNHNIVNGGA GAAAAGYSKL GSSCSSICSF RDVVHGNTRV VHRADNSPES  120
SSLGQETGLL GRKQVTRSRS SSSRSNATGT GAAYNTTSAS SSSRGMQFRK LSGCYECHMI  180
VDPSRYPIPR SSVCVCSQCG EIFPKMDSLE HHQAIRHAVS ELGVEDSGRN IVEIIFKSSW  240
QKKDIPICKI ERILKVHNTQ RTIQRFEDCR DVVKNRALGT TRKNPRCAAD GNELLRFHCA  300
SISCTLGARG SSSLCGSVPG CGVCTIIRHG FQGKAGGEGG KGVRTTASSG RAHDSLSCTD  360
GRRAMLVCRV IAGRVRRIAD DAPTEEDALS SLSAPGSYDS VAGFAGIYSN LEELVVYNPR  420
AILPCFVVIY KALES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-164	C2H2 family protein