PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g688250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 184aa    MW: 20797.8 Da    PI: 5.2969
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g688250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.6e-09145171430
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
               HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                        hn+ Er+RR++i+ ++  L++l+P++
  Pd.00g688250.m01 145 LHNMSERKRRKKIRGKLGALQQLIPNC 171
                       5*************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MTHQVPDWTA TEEGDSSKCF QYEEFGPLPD SVVPHHHPHP QTETETDHDY SLWNINTSGA  60
SGATGAAEDH NHRCFQEIFE DLSNIPLEPT ITPNAIFASD KHFVCDFDKG ESLKTTSRFM  120
ETKSVSGEIR QKQDERPKRT RAAELHNMSE RKRRKKIRGK LGALQQLIPN CNTGDDDSVD  180
YAAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43010.24e-07bHLH family protein