PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g689760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 163aa    MW: 18072.4 Da    PI: 8.6903
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g689760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12e-1076119755
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       ++ ++RR+ri +++  L+el+P+ +      K++ +++LekA+ Y+k Lq
  Pd.00g689760.m01  76 IAAKNRRERISERLKILQELVPNgC------KVDLVTMLEKAISYVKFLQ 119
                       5679*******************77......******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MPNTSKDDHG DEAYGWLYSE ATVVADGFQE PESQEGFHKR PHTGEAMQPL KKQCTNSGTK  60
KPKPKSSSPT KDPQSIAAKN RRERISERLK ILQELVPNGC KVDLVTMLEK AISYVKFLQL  120
QVKVLATDEF WPVQGGKAPD ISQVKEAIDA ILSSQRDTSS SSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.12e-60bHLH family protein