PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g693630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family M-type_MADS
Protein Properties Length: 171aa    MW: 18673.7 Da    PI: 10.2561
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g693630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF75.44.3e-242168249
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      + en  n+qvtfskRr gi+KKA ELSvLC+aev vi+fs+ gk++ y
  Pd.00g693630.m01 21 KLENLNNKQVTFSKRRSGIFKKAAELSVLCGAEVGVIVFSTAGKVFCY 68
                      67999***************************************9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MVILRKLPKR TQGRKRIEIK KLENLNNKQV TFSKRRSGIF KKAAELSVLC GAEVGVIVFS  60
TAGKVFCYGH PNVETVLECY RSGVAPSAVS DDTAGDQNPN REVEHYLMSL EDVRKKVAAR  120
LHEVRILNGT LTPGALPPVP AVHRLCHMPM MTNGFGAQGG QFGGGYHGFG V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-26M-type_MADS family protein